ofxGenomeVisualiser

github.com/nerrull/ofxGenomeVisualiser · @nerrull

OF 0.9 Data Visualization 3D / Point Cloud Animation

3D walker driven by gene expression in cancer patients.

README

ofxGenomeVisualiser

24 hour side-project at the UdeM biohackathon.

https://github.com/BioHackatonUdeM/Projet4

The data is taken from

https://xenabrowser.net/datapages/?dataset=TcgaTargetGtex_rsem_gene_fpkm&host=https%3A%2F%2Ftoil.xenahubs.net.

Simple command to extract patient N's genome from the DB:

cut TcgaTargetGtex_rsem_gene_fpkm -f1,N > N_genome.txt

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